个人简历

工作经历
2016-至今 南方科技大学生物系 讲席教授
2015-2016 德国马科斯•德尔布吕克国家分子医学中心兼柏林夏洛替医学院 终身正(w3)教授
2009-2015 德国马科斯•德尔布吕克国家分子医学中心 基因组中心主任 （2011年获终身研究员位置）
2007-2008 德国马普分子遗传学研究所 青年科学家小组组长
教育背景
2002-2006 德国马普分子遗传学研究所 博士
1999-2002 四川大学华西医学院 硕士
1989-1993 厦门大学 学士

研究领域

主要从事系统生物学及基因组学研究，研究领域包括基于系统生物学的基因调控研究、非编码RNA的鉴定及功能研究、人类疾病遗传学研究、癌症基因组学研究等

近期论文

1.Hou J, Wang X, McShane E, Zauber H, Sun W, Selbach M, Chen W. Extensive allele-specific translational regulation in hybrid mice. Mol Syst Biol. 2015 Aug 7;11(8):825. doi: 10.15252/msb.156240.
2.Gao Q, Sun W, Ballegeer M, Libert C, Chen W.Predominant contribution of cis-regulatory divergence in the evolution of mouse alternative splicing. Mol Syst Biol. 2015 Jul 1;11(7):816. doi: 10.15252/msb.20145970.
3.You X, Vlatkovic I, Babic A, Will T, Epstein I, Tushev G, Akbalik G, Wang M, Glock C, Quedenau C, Wang X, Hou J, Liu H, Sun W, Sambandan S, Chen T, Schuman EM, Chen W. Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity. Nat Neurosci. 2015 Feb 25.doi: 10.1038/nn.3975. [Epub ahead of print]
4.Wang, Y., Gogol-Döring, A., Hu, H., Fröhler, S., Ma, Y., Jens, M., Maaskola, J., Murakawa, Y., Quedenau, C., Landthaler, M., Kalscheuer, V., Wieczorek, D., Wang, Y., Hu, Y. and Chen, W (2013) Integrative analysis revealed the molecular mechanism underlying RBM10-mediated splicing regulation. EMBO Mol Med. 2013 doi: 10.1002/emmm.201302663
5.Sun W, You X, Gogol-Döring A, He H, Kise Y, Sohn M, Chen T, Klebes A, Schmucker D, Chen W (2013) Ultra-deep profiling of alternatively spliced Drosophila Dscam isoforms by circularization-assisted multi-segment sequencing. EMBO J. 2013 Jun 21. doi: 10.1038/emboj.2013.144. [Epub ahead of print]
6.Li N, You X, Chen T, Mackowiak SD, Friedländer MR, Weigt M, Du H, Gogol-Döring A, Chang Z, Dieterich C, Hu Y, Chen W (2013) Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery. Nucleic Acids Res. 2013 Feb 8. [Epub ahead of print]
7.Mazin P, Xiong J, Liu X, Yan Z, Zhang X, Li M, He L, Somel M, Yuan Y, Phoebe Chen YP, Li N, Hu Y, Fu N, Ning Z, Zeng R, Yang H, Chen W*, Gelfand M*, Khaitovich P*.(2013) Widespread splicing changes in human brain development and aging. MolSyst Biol. 2013 Jan 22;9:633.
8.Doering A & Chen W (2012) An overview of the analysis of next generation sequencing data. Methods Mol Biol. 802:249-57.
9.Yan Z, Hu HY, Jiang X, Maierhofer V, Neb E, He L, Hu Y, Hu H, Li N, Chen W*, Khaitovich P* (2011) Widespread expression of piRNA-like molecules in somatic tissues. Nucleic Acids Res. 2011 Aug;39(15):6596-607.
10.Schwanhäusser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J*, Chen W*, Selbach M*. (2011) Global quantification of mammalian gene expression control Nature. 2011 May 19;473(7347):337-42.
11.Adamidi C, Wang Y, Gruen D, Mastrobuoni G, You X, Tolle D, Dodt M, Mackowiak SD, Gogol-Doering A, Oenal P, Rybak A, Ross E, Alvarado AS, Kempa S*, Dieterich C*, Rajewsky N*, Chen W * (2011) De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Res 21(7):1193-200.
12.Somel M*, Guo S, Fu N, Yan Z, Hu HY, Xu Y, Yuan Y, Ning Z, Hu Y, Menzel C, Hu H, Lachmann M, Zeng R, Chen W*, Khaitovich P*. (2010) MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain. Genome Res. 20(9):1207-18.
13.Xu AG, He L, Li Z, Xu Y, Li M, Fu X, Yan Z, Yuan Y, Menzel C, Li N, Somel M, Hu H, Chen W*, Pääbo S*, Khaitovich P*. (2010) Intergenic and repeat transcription in human, chimpanzee and macaque brains measured by RNA-Seq. PLoS Comput Biol. 6:e1000843.
14.Hu H, Wrogemann K, Kalscheuer V, Tzschach A, Richard H, Haas SA, Menzel C, Bienek M, Froyen G, Raynaud M, Van Bokhoven H, Chelly J, Ropers H, Chen W. (2010) Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing. The HUGO Journal: Volume 3, Issue 1, Page 41.
15.Kuss AW, Chen W (2008) MicorRNAs in brain function and disease. Curr Neurol Neurosci Rep. 8(3):190-7.
16.Chen W, Kalscheu V, Tzschach A, Menzel C, Ullmann R, Schulz M, Erdogan F, Li N, Kijas Z, Arkesteijn G, Pajares IL, Goetz-Sothmann M, Heinrich U, Rost I, Dufke A, Grasshoff U, Glaeser BG, Vingron M, Ropers HH. (2008) Mapping translocation breakpoints by next-generation sequencing. Genome Res. 18(7):1143-9.