个人简历

教育背景\r
2003-2007 吉林大学光通信系，工学学士\r
2007-2012 清华大学精密仪器与机械学系，工学博士\r
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工作履历\r
2012-2013 哈佛大学化学与化学生物系，博士后\r
2013-2015 霍华德·休斯医学研究所Janelia研究校园，博士后\r
2015-2016 普渡大学电子与计算机工程学院，博士后\r
2017-至今 清华大学精密仪器系，副教授

研究领域

光学工程、生物光子学、计算成像、超快光学、生物医学科学仪器""

近期论文

2023\r
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Junhao Liang, Weisheng Zhang, Jianghui Yang, Meilong Wu, Qionghai Dai, Hongfang Yin, Ying Xiao & Lingjie Kong,?Deep learning supported discovery of biomarkers for clinical prognosis of liver cancer, Nature Machine Intelligence, https://doi.org/10.1038/s42256-023-00635-3\r
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Jiazhen Zhai, Cheng Jin, and Lingjie Kong, Compact, hybrid light-sheet and Fourier light-field micros-copy with a single objective for high-speed volumetric imaging in vivo, The Journal of Physical Chemistry A, (2023)\r
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Bingqian Zhou, Kuikui Fan, Tianfu Li, Guoming Luan, and Lingjie Kong, A biocompatible hydrogel-coated fiber-optic probe for monitoring pH dynamics in mammalian brains in vivo, Sensors and Actuators B: Chemical (2023)\r
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2022\r
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Jiazhen Zhai, Ruheng Shi, Kuikui Fan and Lingjie Kong, (2022). Background inhibited and speed-loss-free volumetric imaging in vivo based on structured-illumination Fourier light field microscopy, Front. Neurosci. in press\r
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Chen K, Tian Z and Kong L (2022) Advances of optical miniscopes for in vivo imaging of neural activity in freely moving animals. Front. Neurosci. 16:994079. doi: 10.3389/fnins.2022.994079\r
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Cheng Jin*, Chi Liu*, and Lingjie Kong, High axial-resolution optical stimulation of neurons in vivo via two-photon optogenetics with speckle-free beaded-ring pattern, Photonics Research 10(6), 1367-1373 (2022)\r
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Cheng Jin; Chi Liu; Lingjie Kong; Improving Axial Resolution of Optical Stimulation in Two-Photon Optogenetics by Beaded-Ring Pattern, 2022 Biophotonics Congress: Biomedical Optic, Fort Lauderdale, Florida, USA, 24 – 27 April 2022 (Poster presentation)\r
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Jiazhen Zhai; Ruheng Shi; Lingjie Kong, High-contrast, high-speed 3D imaging in vivo with HiLo based Fourier light field microscopy, 2022 Biophotonics Congress: Biomedical Optic,Fort Lauderdale, Florida, USA, 24 – 27 April 2022 (Oral Presentation)\r
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Jiazhen Zhai*, Ruheng SHi*, Lingjie Kong, Improving signal-to-background ratio by orders of magnitude in high-speed volumetric imaging in vivo by robust Fourier light field microscopy, Photonics Research 10(5), 1255-1263 (2022)\r
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2021\r
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Lingjie Kong*, Conor Evans, Lei Su, Daniel S Elson, and Xunbin Wei*, Editorial: Special issue on Translational Biophotonics, Journal of Physics D: Applied Physics (accepted), 2021\r
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Jingjing Guo*, Bingqian Zhou, Zhou Du, Changxi Yang, Lingjie Kong* and Lijun Xu, Soft and plasmonic hydrogel optical probe for glucose monitoring, Nanophotonics 2021,https://doi.org/10.1515/nanoph-2021-0360\r
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Ruheng Shi, Yuanlong Zhang, Tiankuang Zhou, Lingjie Kong, HiLo based line scanning temporal focusing microscopy for high-speed, deep tissue imaging, Membranes 2021, 11, 634. https://doi.org/10.3390/membranes11080634\r
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靳程，孔令杰，双光子荧光显微系统中波前像差对三维点扩散函数的影响，物理实验 2021 (已接收)\r
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Ruheng Shi and Lingjie Kong, Evaluating structured-illumination patterns in optimizing optical-sectioning of HiLo microscopy, J. Phys. D: Appl. Phys. 54 414001 (2021)\r
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Ruheng Shi; Yuanglong Zhang; Tiankuang Zhou; Lingjie Kong, Contrast and axial confinement enhancement in deep imaging via HiLo based line-scanning temporal focusing microscopy, European Conferences on Biomedical Optics Conference, post-deadline poster # EM1A.42,2021 June 20 - 24\r
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2021\r
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Cheng Jin; Chi Liu; Ruheng Shi; Lingjie Kong, Non-Convex Optimization With Spherical Aberration Compensation for Efficient Excitation in Two-Photon Optogenetics, European Conferences on Biomedical Optics Conference, post-deadline poster # EM1A.41,2021 June 20 – 24\r
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孔令杰，讲好科学故事，推进研究生专业课思政教学，大学教育，2021年7月\r
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Ruheng Shi, Yuting Li, Lingjie Kong, Recover speed loss in wide-field, optical-sectioning imaging by interleaved reconstruction, 2021 OSA Biophotonics Congress: Paper# NF1C.5 （口头报告）\r
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Cheng Jin, Ruheng Shi, Chi Liu, Lingjie Kong, Local artifacts under blood vasculatures in two photon imaging in vivo, 2021 OSA Biophotonics Congress: Paper# JW1A .23\r
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孔令杰，靳程，金国藩，基于光遗传学的在体高空间分辨率神经调控技术，中国激光 2021（已接收）\r
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Cheng JIN, Chi LIU, Ruheng SHI, and Lingjie KONG, Precise 3D computer-generated holography based on non-convex optimization with spherical aberration compensation (SAC-NOVO) for two-photon optogenetics, Optics Express 29(13), 20795-20807 (2021)\r
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Cheng Jin, Ruheng Shi, Chi Liu, and Lingjie Kong, Recognizing local artifacts in two-photon imaging of dendrites beneath blood vessels in vivo, Chinese Optics Letter 2021 （已接收）\r
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翟家振，施汝恒，孔令杰，光场显微镜及其在三维生物成像中的应用, 物理与工程，2021 （已接收）\r
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Ruheng Shi, Yuting Li, Lingjie Kong, High‐speed volumetric imaging in vivo based on structured illumination microscopy with interleaved reconstruction, Journal of Biophotonics (2021), https://doi.org/10.1002/jbio.202000513 (内封面文章)\r
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2020\r
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Yuanlong Zhang, Tiankuang Zhou, Lu Fang, Lingjie Kong, Hao Xie, and Qionghai Dai, \