个人简历

林忠旭，男，1978年2月出生，教授，博士，研究方向为棉花分子数量遗传学、图位克隆基因及分子标记辅助育种。1996－2000年在华中农业大学植物科学技术学院作物遗传育种专业学习，获农学学士学位。2000－2005年在植物科学技术学院攻读作物遗传育种博士学位（硕博连读），于2005年毕业，获得农学博士学位。2005年毕业后留校执教，在作物遗传改良国家重点实验室棉花课题组进行研究工作，主要从事棉花分子标记的开发、遗传图谱构建、数量性状定位、图位克隆基因、棉花导入系的构建和分子标记辅助育种。2009年1－8月在美国新墨西哥州立大学从事学术访问，进行棉花功能标记的开发与应用研究

研究领域

棉花分子数量遗传与育种

近期论文

Ayaz Ali Keerio, Chao Shen, Yichun Nie, Muhammad Mahmood Ahmed, Xianlong Zhang and Zhongxu Lin*. QTL mapping for fiber quality and yield traits based on introgression lines derived from Gossypium hirsutum × G. tomentosum. Int. J. Mol. Sci. 2018, 19, 243.
Cong Huang, Chao Shen, Tianwang Wen, Bin Gao, De Zhu, Xiaofang Li, Muhammad Mahmood Ahmed, Dingguo Li*, Zhongxu Lin*. SSR-based association mapping of fiber quality in upland cotton using 8-way MAGIC population. Molecular Genetics and Genomics, 2018, 293:793-805.
Tianwang Wen, Mi Wu, Chao Shen, Bin Gao, De Zhu, Xianlong Zhang, Chunyuan You,* and Zhongxu Lin*. Linkage and association mapping reveals the genetic basis of brown fibre (Gossypium hirsutum). Plant Biotechnology Journal, 2018, 16, 1654–1666.
黄聪，李晓方，李定国*，林忠旭*。利用陆地棉MAGIC 群体定位产量、生育期和株高性状的QTL。作物学报，2018, 44(9): 1320-1333.
戴宝生，郭欢乐，尤春源，张献龙，林忠旭*。棉花陆海杂种标记偏分离染色体上重要农艺性状的QTL定位。棉花学报，2018，30（6）：435―447。
Dai B, Guo H, Huang C, Ahmed MM and Lin Z*. Identification and characterization of segregation distortion loci on cotton chromosome 18. Front Plant Sci, 2017, 7:2037. IF=3.678
Huang C, Nie X, Shen C, You C, Li W, Zhao W, Zhang X* and Lin Z*. Population structure and genetic basis of the agronomic traits of Upland cotton in China revealed by a genome-wide association study using high-density SNPs. Plant Biotechnol J, 2017, 15, 1374-1386. IF =6.305
Ahmed MM, Shen C, Khan AQ, Wahid MA, Shaban M and Lin Z*. A comparative genomics approach revealed evolutionary dynamics of microsatellite imperfection and conservation in genus Gossypium. Hereditas, 2017, 154:12. IF=1.632
Shen C, Jin X, Zhu D and Lin Z*. Uncovering SNP and indel variations of tetraploid cottons by SLAF-seq. BMC Genomics, 2017, 18:247. IF=3.730
Shen C, Li X, Zhang R, Lin Z*. Genome-wide recombination rate variation in a recombination map of cotton. PLoS ONE, 2017, 12(11):e0188682. IF=2.766
沈超，李定国，聂以春，林忠旭*。利用黄褐棉染色体片段导入系定位产量和纤维品质性状QTL。作物学报，2017，43 (12): 1733-1745。
Nie X, Huang C, You C, Li W, Zhao W, Shen C, Zhang B, Wang H, Yan Z, Dai B, Wang M, Zhang X and Lin Z*. Genome-wide SSR-based association mapping for fiber quality in nation-wide Upland cotton inbreed cultivars in China. BMC Genomics, 2016,17:352. IF=3.729
Liu Y, Peng R, Liu F, Wang X, Cui X, Zhou Z, Wang C, Cai X, Wang Y, Lin Z* and Wang K*. A Gossypium BAC clone contains key repeat components distinguishing sub-genome of allotetraploidy cottons. Mol Cytogenet, 2016, 9:27. IF=1.455
Dai B, Guo H, Huang C, Zhang X and Lin Z*. Genomic heterozygosity and hybrid breakdown in cotton (Gossypium): different traits, different effects. BMC Genet, 2016, 17:58. IF=2.266
Li X, Jin X, Wang H, Zhang X, and Lin Z*. Structure, evolution, and comparative genomics of tetraploid cotton based on a high-density genetic linkage map. DNA Res, 2016, 23 (3): 283-293. IF=5.404
Wang H, Huang C, Zhao W, Dai B, Shen C, Zhang B, Li D*, Lin Z*. Identification of QTL for fiber quality and yield traits using two immortalized backcross populations in Upland cotton. PLoS ONE, 2016, 11(12): e0166970. IF=2.806
Nie X, Tu J, Wang B, Zhou X*, Lin Z*. A BIL Population Derived from G. hirsutum and G. barbadense Provides a Resource for Cotton Genetics and Breeding. PLoS ONE, 2015, 10(10): e0141064. IF=3.057
聂新辉，尤春源，鲍健，李晓方，惠慧，刘洪亮，秦江鸿，林忠旭*。基于关联分析的新陆早棉花品种农艺和纤维品质性状优异等位基因挖掘。中国农业科学 2015, 48(15): 2891-2910
Chen X, Jin X, Li X, Lin Z*. Genetic mapping and comparative expression analysis of transcription factors in cotton. PLoS ONE, 2015, 10(5): e0126150. IF=3.057
Wang H, Jin X, Zhang B, Shen C and Lin Z*. Enrichment of an intraspecific genetic map of Upland cotton by developing markers using parental RAD sequencing. DNA Res, 2015, 22(2), 147-160. IF=5.267
Wang H, Huang C, Guo H, Li X, Zhao W, Dai B, Yan Z, Lin Z*. QTL mapping for fiber and yield traits in Upland cotton under multiple environments. PLoS ONE. 2015, 10(6): e0130742. IF=3.057
Said JI, Song M, Wang H, Lin Z, Zhang X, Fang DD, Zhang J. A comparative meta-analysis of QTL between intraspecific Gossypium hirsutum and interspecific G. hirsutum × G. barbadense populations. Mol Genet Genomics, 2015, 290:1003-1025. IF=2.622