个人简历

教育经历
2011.9 2014.10 大连理工大学 计算机应用技术 博士
2007.9 2009.12 大连理工大学 计算机应用 硕士
1999.9 2003.6 大连理工大学 计算机科学与技术 学士
工作经历
2011.3 至今 大连理工大学计算机技术实验室 实验室主任
2003.7 2011.3 大连理工大学计算机技术实验室 实验教师
专利
一种基于句法词向量的生物医学事件触发词识别方法
一种基于特征自动学习的生物医学事件触发词识别方法
一种基于句法词向量的生物医学事件触发词识别方法
著作成果
嵌入式系统开发与应用实例
嵌入式系统设计教程(第三版)
计算机组成原理实验指导
嵌入式系统设计教程（第2版）
科研项目
基于生物医学文献和领域本体的蛋白质复合物预测方法研究, 国家自然科学基金项目, 2013/09/25-2016/12/31, 完成
具有编程功能的阀门电动执行器产品研发, 企事业单位委托科技项目, 2014/01/16-2015/12/30, 进行
科研奖励
辽宁省自然科学三等奖
大连理工大学优秀教材二等奖
辽宁省“十一五”教育科学优秀成果

研究领域

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近期论文

[1]Zhang, Tongxuan,Lin, Hongfei,Ren, Yuqi,Yang, Liang,Xu, Bo,Yang, Zhihao,Wang, Jian,Zhang, Yijia.Adverse drug reaction detection via a multihop self-attention mechanism[J],BMC BIOINFORMATICS,2019,20(1):479
[2]徐博,林鸿飞,杨亮,许侃,张益嘉,张冬瑜,杨志豪,王健.Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion[A],BIBM2018,2018,556-559
[3]Zhang Yijia,Zheng Wei,Lin Hongfei,Wang Jian,Yang Zhihao,Dumontier Michel.Drug-drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths.[J],Bioinformatics (Oxford, England),2017,34(5):828-835
[4]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Liu, Yiwei.An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks[J],BMC GENOMICS,2017,18(Suppl 7):743
[5]Zheng, Wei,Lin, Hongfei,Luo, Ling,Zhao, Zhehuan,Li, Zhengguang,Zhang, Yijia,Yang, Zhihao,Wang, Jian.An attention-based effective neural model for drug-drug interactions extraction[J],BMC BIOINFORMATICS,2017,18(1):445
[6]Wang, Jian,Zhang, Jianhai,An, Yuan,Lin, Hongfei,Yang, Zhihao,Zhang, Yijia,Sun, Yuanyuan.Biomedical event trigger detection by dependency-based word embedding[J],IEEE International Conference on Bioinformatics and Biomedicine,2016,9(Suppl 2):45
[7]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Liu, Yiwei,Sang, Shengtian.A method for predicting protein complex in dynamic PPI networks[J],12th Annual Biotechnology and Bioinformatics Symposium (BIOT),2016,17(Suppl 7):229
[8]Zheng, Wei,Lin, Hongfei,Zhao, Zhehuan,Nu, Bo,Zhang, Yijia,Yang, Zhihao,Wang, Jian.A graph kernel based on context vectors for extracting drug-drug interactions[J],JOURNAL OF BIOMEDICAL INFORMATICS,2016,61:34-43
[9]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian.Construction of dynamic probabilistic protein interaction networks for protein complex identification[J],BMC BIOINFORMATICS,2016,17(1):186
[10]李浩瑞,王健,林鸿飞,杨志豪,张益嘉.基于混合模型的生物事件触发词检测[J],中文信息学报,2016,30(1):36-42
[11]Wang, Jian,Zhang, Jianhai,An, Yuan,Lin, Hongfei,Yang, Zhihao,Zhang, Yijia,Sun, Yuanyuan.Biomedical Event Trigger Detection by Dependency-Based Word Embedding[A],IEEE International Conference on Bioinformatics and Biomedicine,2015,429-432
[12]Wang J.,Liu M.,Lin H.,Yang Z.,Zhang Y.,Wen J.,Yang C..Combining active learning and composite kernel for protein-protein interaction extraction[J],Journal of Computational Information Systems,2015,11(8):2823-2832
[13]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian.Integrating experimental and literature protein-protein interaction data for protein complex prediction[J],BMC GENOMICS,2015,16
[14]张益嘉,林鸿飞,王健.深化实践教学改革,培养高质量创新人才[J],实验科学与技术,2014,12(5):185-187
[15]张益嘉,宋嘉琳,丁男.多层次嵌入式课程实践教学体系的建设与探索[J],实验科学与技术,2014,12(4):148-150
[16]张益嘉,许侃,宋嘉琳.计算机专业生产实习的改革与探索[J],实验室科学,2014,17(4):174-176,180
[17]张益嘉,林鸿飞,王健.计算机专业实践教学体系建设的研究与探索[J],实验室科学,2014,17(3):206-208
[18]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Xu, Bo.Integrating Multiple Biomedical Resources for Protein Complex Prediction[A],IEEE International Conference on Bioinformatics and Biomedicine (IEEEBIBM),2013,456-459
[19]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian.Construction of Ontology Augmented Networks for Protein Complex Prediction[J],PLOS ONE,2013,8(5):e62077
[20]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Li, Yanpeng,Xu, Bo.Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks[J],IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS,2013,10(3):729-741
[21]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Li, Yanpeng.Biomolecular event trigger detection using neighborhood hash features[J],JOURNAL OF THEORETICAL BIOLOGY,2013,318:22-28
[22]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Li, Yanpeng.A Single Kernel-Based Approach to Extract Drug-Drug Interactions from Biomedical Literature[J],PLOS ONE,2012,7(11):e48901
[23]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Wang, Jian,Li, Yanpeng.Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction[J],IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS,2012,9(4):1190-1202
[24]张益嘉,宋嘉琳,丁男.嵌入式教学与创新能力培养[J],教育与教学论文集,2012,25:174-176
[25]宋嘉琳,张益嘉.计算机组成原理实验的改革与实践[J],教育与教学研究论文集,2012,25:101-103
[26]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Li, Yanpeng.Neighborhood hash graph kernel for protein-protein interaction extraction[J],JOURNAL OF BIOMEDICAL INFORMATICS,2011,44(6):1086-1092
[27]Wang, Jian,Xie, Dong,Lin, Hongfei,Yang, Zhihao,Zhang, Yijia.Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity[A],IEEE International Conference on Bioinformatics and Biomedicine (BIBM),2011,582-585
[28]Zhang, Yijia,Lin, Hongfei,Yang, Zhihao,Li, Yanpeng.Protein-Protein Interaction Extraction Based on Improved All-Paths Kernel[J],JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE,2011,8(10):1925-1932
[29]张益嘉,马洪连,丁男.实时多处理器系统的双优先级调度算法[J],计算机工程,2011,37(1):265-267
[30]张益嘉,王健.A Novel Scalable MPSoC Architecture Based on FPGA[J],Future Intelligent Information Systems,2011,86(1):239-245
[31]张明勇,马洪连,丁男,张益嘉.基于ARM6410的便携式无线医疗检测系统的设计与实现[J],软件,2010,31(12):23-27